Environmental DNA as a tool for biodiversity monitoring in aquatic ecosystems – a review

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding.

Global biodiversity in freshwater and the oceans is declining at high rates. Reliable tools for assessing and monitoring aquatic biodiversity, especially for rare and secretive species, are important for efficient and timely management. Recent advances in DNA sequencing have provided a new tool for species detection from DNA present in the environment. In this study, we tested whether an enviro...

Caffeine as an environmental indicator for assessing urban aquatic ecosystems.

This study aimed to evaluate the co-occurrence of caffeine and the extent of its influence as compared to other traditional water quality parameters (microbiological and physico-chemical) in order to characterize it as an efficient indicator of anthropic pollution of urban aquatic environments. Caffeine is an ingredient in a variety of beverages (coffee, tea, and caffeinated soft drinks) and nu...

Terrestrial and aquatic invertebrates as bioindicators for environmental monitoring, with particular reference to mountain ecosystems.

The use of terrestrial and aquatic invertebrates as a management tool for monitoring change in ecosystems is reviewed and critically evaluated. Their suitability and value for assessing a range of environmental problems from pollution impacts, through habitat evaluation for conservation to the long-term degradation and recovery of ecosystems, is critically discussed. Guidelines are provided for...

Environmental Evaluation and Monitoring of Agro-Ecosystems Biodiversity

Monitoring endangered freshwater biodiversity using environmental DNA.

Freshwater ecosystems are among the most endangered habitats on Earth, with thousands of animal species known to be threatened or already extinct. Reliable monitoring of threatened organisms is crucial for data-driven conservation actions but remains a challenge owing to nonstandardized methods that depend on practical and taxonomic expertise, which is rapidly declining. Here, we show that a di...